Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC7.77□□□□□ -1.17
TcraP01849 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Ighv5-7-201ENSMUST00000192302 244 ntBASIC7.77□□□□□ -1.17
TcraP01849 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Gm37259-201ENSMUST00000193903 849 ntBASIC7.77□□□□□ -1.17
TcraP01849 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Gm5869-201ENSMUST00000200248 1257 ntBASIC7.77□□□□□ -1.17
TcraP01849 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC7.77□□□□□ -1.17
TcraP01849 Gm9797-202ENSMUST00000218003 294 ntBASIC7.77□□□□□ -1.17
TcraP01849 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC7.77□□□□□ -1.17
TcraP01849 AC154436.1-201ENSMUST00000227272 782 ntBASIC7.77□□□□□ -1.17
TcraP01849 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
TcraP01849 Gm8385-201ENSMUST00000058999 643 ntBASIC7.77□□□□□ -1.17
TcraP01849 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Gm5537-201ENSMUST00000091117 1252 ntBASIC7.77□□□□□ -1.17
TcraP01849 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC7.77□□□□□ -1.17
TcraP01849 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TcraP01849 Gm6768-201ENSMUST00000022467 1878 ntBASIC7.77□□□□□ -1.17
TcraP01849 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TcraP01849 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 L3mbtl3-201ENSMUST00000040219 4572 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
TcraP01849 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
TcraP01849 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Gm11663-201ENSMUST00000117888 290 ntBASIC7.76□□□□□ -1.17
TcraP01849 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC7.76□□□□□ -1.17
TcraP01849 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC7.76□□□□□ -1.17
TcraP01849 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
TcraP01849 Saa-ps-201ENSMUST00000211148 320 ntBASIC7.76□□□□□ -1.17
TcraP01849 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 AC159002.1-201ENSMUST00000226714 924 ntBASIC7.76□□□□□ -1.17
TcraP01849 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Gm9072-201ENSMUST00000218390 1514 ntBASIC7.76□□□□□ -1.17
TcraP01849 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Gria4-201ENSMUST00000027020 5441 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Gm5171-201ENSMUST00000214944 1415 ntBASIC7.76□□□□□ -1.17
TcraP01849 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Osbpl5-201ENSMUST00000020411 3994 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
TcraP01849 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
TcraP01849 AC154186.1-201ENSMUST00000227711 1597 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms