Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pknox1O70477 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pknox1O70477 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pknox1O70477 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.59□□□□□ -0.71
Pknox1O70477 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.59□□□□□ -0.71
Pknox1O70477 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Pknox1O70477 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pknox1O70477 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pknox1O70477 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Pknox1O70477 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pknox1O70477 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pknox1O70477 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.58□□□□□ -0.72
Pknox1O70477 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.58□□□□□ -0.72
Pknox1O70477 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm12274-201ENSMUST00000120062 385 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 Gm15554-201ENSMUST00000120406 913 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.58□□□□□ -0.72
Pknox1O70477 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 Gm43380-201ENSMUST00000200421 220 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 Gm44100-201ENSMUST00000204329 436 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Pknox1O70477 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pknox1O70477 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pknox1O70477 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.58□□□□□ -0.72
Pknox1O70477 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.58□□□□□ -0.72
Pknox1O70477 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pknox1O70477 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Pknox1O70477 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.57□□□□□ -0.72
Pknox1O70477 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm17391-201ENSMUST00000171036 126 ntBASIC10.57□□□□□ -0.72
Pknox1O70477 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.57□□□□□ -0.72
Pknox1O70477 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.57□□□□□ -0.72
Pknox1O70477 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Pknox1O70477 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.57□□□□□ -0.72
Pknox1O70477 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.57□□□□□ -0.72
Pknox1O70477 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.57□□□□□ -0.72
Pknox1O70477 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC10.57□□□□□ -0.72
Pknox1O70477 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.57□□□□□ -0.72
Pknox1O70477 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pknox1O70477 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms