Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
B020004C17RikJ3QP07 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm7701-201ENSMUST00000163185 1479 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm7781-201ENSMUST00000117258 788 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm8809-201ENSMUST00000119367 743 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm17797-201ENSMUST00000182175 997 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm16477-201ENSMUST00000085365 801 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Gm17415-201ENSMUST00000096427 789 ntBASIC11.96□□□□□ -0.49
B020004C17RikJ3QP07 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Gm42731-201ENSMUST00000201839 1641 ntBASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
B020004C17RikJ3QP07 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm23521-201ENSMUST00000177845 110 ntBASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm37141-201ENSMUST00000191938 422 ntBASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
B020004C17RikJ3QP07 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms