Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Gm12254-201ENSMUST00000134617 471 ntBASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm28179-201ENSMUST00000188365 613 ntBASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm29487-201ENSMUST00000190146 256 ntBASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm19090-201ENSMUST00000218187 774 ntBASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lgr5Q9Z1P4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm15032-201ENSMUST00000118547 411 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm15132-201ENSMUST00000118581 652 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm7805-201ENSMUST00000154348 448 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm23999-201ENSMUST00000158057 104 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm23757-201ENSMUST00000158353 100 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm8022-201ENSMUST00000191763 904 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm43037-201ENSMUST00000196808 250 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm5881-201ENSMUST00000204737 367 ntBASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lgr5Q9Z1P4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Gm12439-201ENSMUST00000117162 365 ntBASIC12.78□□□□□ -0.36
Lgr5Q9Z1P4 Gm12736-201ENSMUST00000119330 236 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms