Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13284-201ENSMUST00000121020 547 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm27441-201ENSMUST00000185000 105 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm3017-201ENSMUST00000203603 1126 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm10752-201ENSMUST00000218348 729 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm18042-201ENSMUST00000219887 790 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm19009-201ENSMUST00000223072 823 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm23680-201ENSMUST00000083162 164 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Spata33-207ENSMUST00000212760 4074 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm13117-201ENSMUST00000120894 691 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm4879-201ENSMUST00000122190 1272 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm7255-201ENSMUST00000187371 908 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm28746-201ENSMUST00000187453 380 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Platr10-202ENSMUST00000191479 818 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sec61a2Q9JLR1 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Sec61a2Q9JLR1 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms