Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Gm27953-201ENSMUST00000185171 143 ntBASIC10.22□□□□□ -0.77
Ube4bQ9ES00 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Gm28686-201ENSMUST00000187404 609 ntBASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.22□□□□□ -0.77
Ube4bQ9ES00 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Gm25125-201ENSMUST00000083340 136 ntBASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 AC132467.2-201ENSMUST00000226306 2253 ntBASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ube4bQ9ES00 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Sulf2-202ENSMUST00000109249 4580 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Zfp672-202ENSMUST00000064786 2765 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm44741-201ENSMUST00000207503 2127 ntBASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm8815-201ENSMUST00000173809 620 ntBASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ube4bQ9ES00 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm10531-201ENSMUST00000193527 2303 ntBASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Gm38910-201ENSMUST00000204630 2448 ntBASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Ube4bQ9ES00 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm14724-201ENSMUST00000118400 537 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm8566-201ENSMUST00000120174 465 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.2□□□□□ -0.78
Ube4bQ9ES00 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms