Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.18□□□□□ -0.62
Chmp2aQ9DB34 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm6677-201ENSMUST00000195100 441 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm18035-201ENSMUST00000211962 589 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm26670-202ENSMUST00000226862 340 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chmp2aQ9DB34 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm6158-201ENSMUST00000109467 904 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm5244-201ENSMUST00000164001 339 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm22877-201ENSMUST00000175451 105 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm27441-201ENSMUST00000185000 105 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm43249-201ENSMUST00000200464 458 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm5298-201ENSMUST00000201122 892 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm8181-201ENSMUST00000062242 669 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Gm7589-201ENSMUST00000085631 534 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chmp2aQ9DB34 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms