Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.28□□□□□ -0.6
Usp11Q99K46 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Usp11Q99K46 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC11.28□□□□□ -0.6
Usp11Q99K46 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usp11Q99K46 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp11Q99K46 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp11Q99K46 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usp11Q99K46 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Mir6998-201ENSMUST00000183343 64 ntBASIC11.27□□□□□ -0.61
Usp11Q99K46 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.27□□□□□ -0.61
Usp11Q99K46 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.27□□□□□ -0.61
Usp11Q99K46 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usp11Q99K46 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Usp11Q99K46 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.27□□□□□ -0.61
Usp11Q99K46 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usp11Q99K46 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.27□□□□□ -0.61
Usp11Q99K46 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Usp11Q99K46 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Usp11Q99K46 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm10169-201ENSMUST00000121822 348 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Usp11Q99K46 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Usp11Q99K46 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.26□□□□□ -0.61
Usp11Q99K46 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.26□□□□□ -0.61
Usp11Q99K46 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usp11Q99K46 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms