Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.64□□□□□ -0.39
Col20a1Q923P0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col20a1Q923P0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col20a1Q923P0 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm8482-201ENSMUST00000117972 471 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm13841-201ENSMUST00000118829 483 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm11449-201ENSMUST00000119175 476 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm12337-201ENSMUST00000119634 400 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm5395-201ENSMUST00000121650 915 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm8210-201ENSMUST00000178557 483 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm24954-201ENSMUST00000178831 110 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm15454-201ENSMUST00000179718 483 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm6518-201ENSMUST00000208450 342 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm45893-201ENSMUST00000211899 247 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm6331-201ENSMUST00000217890 450 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm8796-201ENSMUST00000219122 936 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm8557-201ENSMUST00000220777 475 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm6344-201ENSMUST00000075962 483 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm10238-201ENSMUST00000089689 408 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm6783-201ENSMUST00000120916 1437 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.63□□□□□ -0.39
Col20a1Q923P0 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col20a1Q923P0 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Col20a1Q923P0 Gm15264-201ENSMUST00000118050 502 ntBASIC12.62□□□□□ -0.39
Col20a1Q923P0 Gm16209-201ENSMUST00000118457 627 ntBASIC12.62□□□□□ -0.39
Col20a1Q923P0 Gm15982-201ENSMUST00000121681 554 ntBASIC12.62□□□□□ -0.39
Col20a1Q923P0 Gm10171-201ENSMUST00000126220 628 ntBASIC12.62□□□□□ -0.39
Col20a1Q923P0 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.62□□□□□ -0.39
Col20a1Q923P0 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col20a1Q923P0 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms