Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm43097-201ENSMUST00000196867 151 ntBASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm8255-201ENSMUST00000218693 305 ntBASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim29Q8R2Q0 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm22442-201ENSMUST00000157256 144 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm18776-201ENSMUST00000188833 654 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim29Q8R2Q0 Gm7967-202ENSMUST00000191042 5042 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm25063-201ENSMUST00000104666 94 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm44155-201ENSMUST00000203923 412 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm7600-201ENSMUST00000209657 785 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm2594-201ENSMUST00000214774 742 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm5178-201ENSMUST00000219380 898 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Gm7525-201ENSMUST00000219425 454 ntBASIC12.22□□□□□ -0.45
Trim29Q8R2Q0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms