Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 AC130671.3-201ENSMUST00000227393 1897 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm44975-201ENSMUST00000207435 1390 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm12529-201ENSMUST00000119529 268 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm12011-201ENSMUST00000119734 618 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm4996-201ENSMUST00000122042 784 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm44159-201ENSMUST00000204065 442 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 n-R5s5-201ENSMUST00000083134 119 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm10689-201ENSMUST00000098864 432 ntBASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx54Q8K4L0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 AC154186.1-201ENSMUST00000227711 1597 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm8482-201ENSMUST00000117972 471 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm15539-201ENSMUST00000118452 566 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm13841-201ENSMUST00000118829 483 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm11449-201ENSMUST00000119175 476 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 1700028P15Rik-203ENSMUST00000151904 519 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm8210-201ENSMUST00000178557 483 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm15454-201ENSMUST00000179718 483 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm7255-201ENSMUST00000187371 908 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm42710-201ENSMUST00000200608 985 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm7997-201ENSMUST00000210546 980 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 AC154643.1-201ENSMUST00000225643 625 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Gm6344-201ENSMUST00000075962 483 ntBASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx54Q8K4L0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms