Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Gm1848-201ENSMUST00000120711 789 ntBASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Mir7076-201ENSMUST00000183519 74 ntBASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Gm45550-201ENSMUST00000209380 946 ntBASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cchcr1Q8K2I2 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gm26013-201ENSMUST00000104404 119 ntBASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gm43138-201ENSMUST00000199123 708 ntBASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cchcr1Q8K2I2 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Gm25661-201ENSMUST00000157704 296 ntBASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Gm44551-201ENSMUST00000208804 171 ntBASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cchcr1Q8K2I2 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms