Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm6158-201ENSMUST00000109467 904 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm20414-201ENSMUST00000172918 646 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm23400-201ENSMUST00000174994 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm26463-201ENSMUST00000175065 101 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm24332-201ENSMUST00000175102 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25959-201ENSMUST00000175112 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm22475-201ENSMUST00000175169 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm22903-201ENSMUST00000175193 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25070-201ENSMUST00000175237 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm24159-201ENSMUST00000175264 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25299-201ENSMUST00000175283 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm23798-201ENSMUST00000175560 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm23802-201ENSMUST00000175565 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25708-201ENSMUST00000177687 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm24370-201ENSMUST00000178007 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm23049-201ENSMUST00000178068 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm28019-201ENSMUST00000178138 101 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25571-201ENSMUST00000178322 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25355-201ENSMUST00000178456 101 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm24975-201ENSMUST00000178492 101 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm23189-201ENSMUST00000178954 102 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25100-201ENSMUST00000179750 101 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm23064-201ENSMUST00000179866 101 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm37852-201ENSMUST00000193027 350 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm8255-201ENSMUST00000218693 305 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm40879-201ENSMUST00000220759 612 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm8894-201ENSMUST00000074642 666 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm25125-201ENSMUST00000083340 136 ntBASIC12.51□□□□□ -0.41
Vps53Q8CCB4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps53Q8CCB4 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm14497-201ENSMUST00000119537 580 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm4917-201ENSMUST00000121452 650 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Mir1896-201ENSMUST00000122641 81 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm44323-201ENSMUST00000198689 129 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm5599-201ENSMUST00000209602 788 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vps53Q8CCB4 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms