Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Zfp958-202ENSMUST00000202692 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Lysmd4Q8CC84 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm4654-201ENSMUST00000183305 982 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Mir6927-201ENSMUST00000184494 71 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 AC154431.1-201ENSMUST00000224910 880 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.55□□□□□ -0.88
Lysmd4Q8CC84 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Gm4454-201ENSMUST00000190585 2578 ntBASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Gm16166-201ENSMUST00000118291 787 ntBASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Gm3828-201ENSMUST00000121817 257 ntBASIC9.54□□□□□ -0.88
Lysmd4Q8CC84 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms