Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Nln-205ENSMUST00000224945 2486 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm22582-201ENSMUST00000102283 94 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm25830-201ENSMUST00000158923 132 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm26119-201ENSMUST00000175601 104 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm18035-201ENSMUST00000211962 589 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm5189-201ENSMUST00000221796 261 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm8181-201ENSMUST00000062242 669 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim9Q8C7M3 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm24809-201ENSMUST00000175318 271 ntBASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm23153-201ENSMUST00000175323 313 ntBASIC11.76□□□□□ -0.53
Trim9Q8C7M3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm5805-201ENSMUST00000072779 456 ntBASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 AC125351.1-201ENSMUST00000221438 2223 ntBASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Gm37583-201ENSMUST00000195460 2487 ntBASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim9Q8C7M3 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms