Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm11736-201ENSMUST00000121468 505 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm37944-201ENSMUST00000194233 414 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm43726-201ENSMUST00000199110 775 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm5311-201ENSMUST00000203518 709 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm7904-201ENSMUST00000217049 465 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm29689-201ENSMUST00000221076 589 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 Rgr-203ENSMUST00000225070 4704 ntBASIC11.88□□□□□ -0.51
Usp6nlQ80XC3 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm38111-201ENSMUST00000194817 2741 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm20091-201ENSMUST00000179683 189 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Usp6nlQ80XC3 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm11473-201ENSMUST00000118980 359 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm26208-201ENSMUST00000158677 124 ntBASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Usp6nlQ80XC3 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms