Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Scaf4Q6PFF0 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm37003-201ENSMUST00000194702 2827 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm14277-201ENSMUST00000121195 360 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm3828-201ENSMUST00000121817 257 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm23699-201ENSMUST00000158835 135 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm16165-201ENSMUST00000160140 795 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm21092-201ENSMUST00000178995 955 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Mir6420-201ENSMUST00000185032 102 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm42780-201ENSMUST00000197083 734 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm8162-201ENSMUST00000213951 665 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm2594-201ENSMUST00000214774 742 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Scaf4Q6PFF0 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm12389-201ENSMUST00000117696 418 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm25343-201ENSMUST00000157460 107 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm23045-201ENSMUST00000175041 96 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Mir8115-201ENSMUST00000184992 119 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm43671-201ENSMUST00000200422 433 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Mir7686-201ENSMUST00000200604 57 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Scaf4Q6PFF0 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Scaf4Q6PFF0 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms