Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup98Q6PFD9 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm23521-201ENSMUST00000177845 110 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm30652-201ENSMUST00000199103 430 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm6353-201ENSMUST00000223234 1051 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 AC156016.4-201ENSMUST00000227470 647 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm37909-201ENSMUST00000193157 2159 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm17782-201ENSMUST00000174345 880 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 AC116596.1-201ENSMUST00000228112 1762 ntBASIC12.41□□□□□ -0.42
Nup98Q6PFD9 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nup98Q6PFD9 Gm42731-201ENSMUST00000201839 1641 ntBASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Gm13197-201ENSMUST00000117204 225 ntBASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Gm13758-201ENSMUST00000118699 743 ntBASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup98Q6PFD9 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup98Q6PFD9 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup98Q6PFD9 Gm43737-201ENSMUST00000199915 2740 ntBASIC12.4□□□□□ -0.43
Nup98Q6PFD9 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Nup98Q6PFD9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Gm24066-201ENSMUST00000104515 131 ntBASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 AC116797.2-203ENSMUST00000225290 565 ntBASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Gm26205-201ENSMUST00000082907 134 ntBASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup98Q6PFD9 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms