Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox1P53783 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.03□□□□□ -0.64
Sox1P53783 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sox1P53783 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox1P53783 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sox1P53783 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox1P53783 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.02□□□□□ -0.64
Sox1P53783 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox1P53783 Gm32072-201ENSMUST00000200803 1434 ntBASIC11.02□□□□□ -0.64
Sox1P53783 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox1P53783 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.02□□□□□ -0.64
Sox1P53783 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox1P53783 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Gm15968-201ENSMUST00000119342 1168 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox1P53783 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Gm23999-201ENSMUST00000158057 104 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC11.02□□□□□ -0.65
Sox1P53783 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox1P53783 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox1P53783 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox1P53783 Gm37012-201ENSMUST00000194991 1078 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox1P53783 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Gm30619-201ENSMUST00000213962 686 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox1P53783 Ermard-209ENSMUST00000226561 1019 ntBASIC11.02□□□□□ -0.65
Sox1P53783 AC158122.1-201ENSMUST00000227398 673 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox1P53783 Atf7-201ENSMUST00000096143 390 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox1P53783 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox1P53783 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sox1P53783 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Gm2492-201ENSMUST00000221355 1394 ntBASIC11.02□□□□□ -0.65
Sox1P53783 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox1P53783 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox1P53783 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox1P53783 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sox1P53783 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Sox1P53783 Gm11951-201ENSMUST00000116005 431 ntBASIC11.01□□□□□ -0.65
Sox1P53783 Gm14407-201ENSMUST00000121260 447 ntBASIC11.01□□□□□ -0.65
Sox1P53783 Gm12950-201ENSMUST00000121683 417 ntBASIC11.01□□□□□ -0.65
Sox1P53783 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC11.01□□□□□ -0.65
Sox1P53783 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Gm29485-201ENSMUST00000190220 282 ntBASIC11.01□□□□□ -0.65
Sox1P53783 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC11.01□□□□□ -0.65
Sox1P53783 Gm7210-201ENSMUST00000209309 1067 ntBASIC11.01□□□□□ -0.65
Sox1P53783 AC154506.2-201ENSMUST00000225481 1276 ntBASIC11.01□□□□□ -0.65
Sox1P53783 AC161877.1-201ENSMUST00000227736 699 ntBASIC11.01□□□□□ -0.65
Sox1P53783 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Sox1P53783 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC11.01□□□□□ -0.65
Sox1P53783 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox1P53783 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms