Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Pdx1P52946 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm11411-201ENSMUST00000117951 719 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Gm5764-201ENSMUST00000118817 885 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm24346-201ENSMUST00000158712 194 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Gm18733-202ENSMUST00000174447 401 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Gm22876-201ENSMUST00000175450 298 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.58□□□□□ -0.72
Pdx1P52946 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm32111-201ENSMUST00000207689 846 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pdx1P52946 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.58□□□□□ -0.72
Pdx1P52946 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pdx1P52946 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Pdx1P52946 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm14219-201ENSMUST00000120414 288 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 Gm15031-201ENSMUST00000121341 210 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 Gm12950-201ENSMUST00000121683 417 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.57□□□□□ -0.72
Pdx1P52946 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.57□□□□□ -0.72
Pdx1P52946 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm9372-201ENSMUST00000168454 430 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pdx1P52946 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.57□□□□□ -0.72
Pdx1P52946 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm7319-201ENSMUST00000210047 778 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.57□□□□□ -0.72
Pdx1P52946 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.57□□□□□ -0.72
Pdx1P52946 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.57□□□□□ -0.72
Pdx1P52946 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.57□□□□□ -0.72
Pdx1P52946 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Pdx1P52946 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Pdx1P52946 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.57□□□□□ -0.72
Pdx1P52946 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.57□□□□□ -0.72
Pdx1P52946 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
Pdx1P52946 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdx1P52946 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pdx1P52946 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms