Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm42859-201ENSMUST00000199572 193 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm5051-201ENSMUST00000204085 485 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm45770-201ENSMUST00000212105 616 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.67□□□□□ -0.86
Rfx3P48381 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm10263-201ENSMUST00000085163 300 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rfx3P48381 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rfx3P48381 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rfx3P48381 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Gm15197-201ENSMUST00000120526 478 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.66□□□□□ -0.86
Rfx3P48381 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.66□□□□□ -0.86
Rfx3P48381 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.66□□□□□ -0.86
Rfx3P48381 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Gm43163-201ENSMUST00000196571 442 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Gm18042-201ENSMUST00000219887 790 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.66□□□□□ -0.86
Rfx3P48381 AC165260.2-203ENSMUST00000224237 336 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.66□□□□□ -0.86
Rfx3P48381 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Rfx3P48381 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.66□□□□□ -0.86
Rfx3P48381 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.66□□□□□ -0.86
Rfx3P48381 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.66□□□□□ -0.86
Rfx3P48381 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.66□□□□□ -0.86
Rfx3P48381 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Rfx3P48381 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Rfx3P48381 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.65□□□□□ -0.86
Rfx3P48381 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Rfx3P48381 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms