Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Gm23105-201ENSMUST00000083719 134 ntBASIC8.77□□□□□ -1.01
VhlP40338 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
VhlP40338 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
VhlP40338 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
VhlP40338 Gm13437-201ENSMUST00000122434 1981 ntBASIC8.77□□□□□ -1.01
VhlP40338 Gm6641-201ENSMUST00000196100 1315 ntBASIC8.77□□□□□ -1.01
VhlP40338 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
VhlP40338 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
VhlP40338 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
VhlP40338 Gm15604-201ENSMUST00000118350 1456 ntBASIC8.77□□□□□ -1.01
VhlP40338 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Gm20796-201ENSMUST00000180355 5838 ntBASIC8.76□□□□□ -1.01
VhlP40338 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 AC160340.2-201ENSMUST00000220812 3675 ntBASIC8.76□□□□□ -1.01
VhlP40338 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Gm23272-201ENSMUST00000104053 129 ntBASIC8.76□□□□□ -1.01
VhlP40338 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC8.76□□□□□ -1.01
VhlP40338 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC8.76□□□□□ -1.01
VhlP40338 Gm15352-201ENSMUST00000118696 270 ntBASIC8.76□□□□□ -1.01
VhlP40338 Gm15554-201ENSMUST00000120406 913 ntBASIC8.76□□□□□ -1.01
VhlP40338 Mir1893-201ENSMUST00000122565 83 ntBASIC8.76□□□□□ -1.01
VhlP40338 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC8.76□□□□□ -1.01
VhlP40338 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC8.76□□□□□ -1.01
VhlP40338 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Gm42780-201ENSMUST00000197083 734 ntBASIC8.76□□□□□ -1.01
VhlP40338 Gm44315-201ENSMUST00000203041 219 ntBASIC8.76□□□□□ -1.01
VhlP40338 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 AC122408.1-201ENSMUST00000218949 218 ntBASIC8.76□□□□□ -1.01
VhlP40338 AC154276.3-201ENSMUST00000227643 998 ntBASIC8.76□□□□□ -1.01
VhlP40338 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Gm7551-201ENSMUST00000089593 1074 ntBASIC8.76□□□□□ -1.01
VhlP40338 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Gm45191-201ENSMUST00000205846 5439 ntBASIC8.76□□□□□ -1.01
VhlP40338 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC8.76□□□□□ -1.01
VhlP40338 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
VhlP40338 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
VhlP40338 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
VhlP40338 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.76□□□□□ -1.01
VhlP40338 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VhlP40338 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VhlP40338 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VhlP40338 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VhlP40338 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VhlP40338 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VhlP40338 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VhlP40338 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
VhlP40338 Gm45597-201ENSMUST00000211524 1994 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms