Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Upk2P38575 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC9.36□□□□□ -0.91
Upk2P38575 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Gm6158-201ENSMUST00000109467 904 ntBASIC9.36□□□□□ -0.91
Upk2P38575 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Mir1901-201ENSMUST00000122616 78 ntBASIC9.36□□□□□ -0.91
Upk2P38575 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Upk2P38575 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC9.36□□□□□ -0.91
Upk2P38575 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9.36□□□□□ -0.91
Upk2P38575 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC9.36□□□□□ -0.91
Upk2P38575 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.36□□□□□ -0.91
Upk2P38575 Gm43811-201ENSMUST00000202862 695 ntBASIC9.36□□□□□ -0.91
Upk2P38575 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.36□□□□□ -0.91
Upk2P38575 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.36□□□□□ -0.91
Upk2P38575 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Upk2P38575 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Upk2P38575 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Upk2P38575 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.36□□□□□ -0.91
Upk2P38575 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.36□□□□□ -0.91
Upk2P38575 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.36□□□□□ -0.91
Upk2P38575 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Upk2P38575 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.35□□□□□ -0.91
Upk2P38575 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Upk2P38575 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.35□□□□□ -0.91
Upk2P38575 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Upk2P38575 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm25053-201ENSMUST00000103982 133 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm25922-201ENSMUST00000104281 130 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.35□□□□□ -0.91
Upk2P38575 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC9.35□□□□□ -0.91
Upk2P38575 Gm11824-201ENSMUST00000120191 846 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm14165-201ENSMUST00000121456 952 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm5697-201ENSMUST00000122295 2482 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Gm24679-201ENSMUST00000158762 111 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Gm26119-201ENSMUST00000175601 104 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Mir6998-201ENSMUST00000183343 64 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm27953-201ENSMUST00000185171 143 ntBASIC9.35□□□□□ -0.91
Upk2P38575 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Gm25053-202ENSMUST00000199731 132 ntBASIC9.35□□□□□ -0.91
Upk2P38575 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Upk2P38575 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Upk2P38575 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms