Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Mro-202ENSMUST00000120033 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx1P18111 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
Cdx1P18111 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm11628-201ENSMUST00000117568 171 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Gm8566-201ENSMUST00000120174 465 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC8.69□□□□□ -1.02
Cdx1P18111 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC8.69□□□□□ -1.02
Cdx1P18111 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Cdx1P18111 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm8956-201ENSMUST00000203939 825 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm44711-201ENSMUST00000205414 1264 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Gm4607-201ENSMUST00000206649 577 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Gm8285-201ENSMUST00000208293 759 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 AC166992.1-201ENSMUST00000216356 565 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx1P18111 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Cdx1P18111 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 AC132467.2-201ENSMUST00000226306 2253 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Gm9072-201ENSMUST00000218390 1514 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC8.69□□□□□ -1.02
Cdx1P18111 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Siglech-201ENSMUST00000060416 2138 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cdx1P18111 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Cdx1P18111 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.68□□□□□ -1.02
Cdx1P18111 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm43274-201ENSMUST00000202545 5000 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC8.68□□□□□ -1.02
Cdx1P18111 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm25226-201ENSMUST00000158198 123 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm5706-201ENSMUST00000181525 993 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC8.68□□□□□ -1.02
Cdx1P18111 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC8.68□□□□□ -1.02
Cdx1P18111 Gm43058-201ENSMUST00000197645 625 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Mir7686-201ENSMUST00000200604 57 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 AC154290.1-201ENSMUST00000223786 1240 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 AC151275.1-201ENSMUST00000224870 585 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC8.68□□□□□ -1.02
Cdx1P18111 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Cdx1P18111 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Cdx1P18111 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms