Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chmp6P0C0A3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm24074-201ENSMUST00000158178 260 ntBASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Gm7525-201ENSMUST00000219425 454 ntBASIC11.68□□□□□ -0.54
Chmp6P0C0A3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chmp6P0C0A3 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm11380-201ENSMUST00000118067 560 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm13351-201ENSMUST00000118087 414 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm25830-201ENSMUST00000158923 132 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Platr10-202ENSMUST00000191479 818 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm37365-201ENSMUST00000193109 409 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm19091-201ENSMUST00000208120 978 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm2594-201ENSMUST00000214774 742 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Capsl-202ENSMUST00000226688 739 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm20796-201ENSMUST00000180355 5838 ntBASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp6P0C0A3 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp6P0C0A3 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms