Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC8.78□□□□□ -1
Hmgb3O54879 Gm8342-201ENSMUST00000209839 757 ntBASIC8.78□□□□□ -1
Hmgb3O54879 Gm270-201ENSMUST00000223010 976 ntBASIC8.78□□□□□ -1
Hmgb3O54879 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Hmgb3O54879 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Hmgb3O54879 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Hmgb3O54879 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC8.78□□□□□ -1
Hmgb3O54879 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hmgb3O54879 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC8.78□□□□□ -1
Hmgb3O54879 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC8.77□□□□□ -1
Hmgb3O54879 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC8.77□□□□□ -1
Hmgb3O54879 AC131068.2-201ENSMUST00000226175 1453 ntBASIC8.77□□□□□ -1
Hmgb3O54879 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC8.77□□□□□ -1
Hmgb3O54879 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm5822-201ENSMUST00000161562 1378 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm37567-201ENSMUST00000193241 2279 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm13916-201ENSMUST00000117368 628 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm12570-201ENSMUST00000122047 1030 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm18038-201ENSMUST00000197900 485 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm17825-201ENSMUST00000206836 794 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm44967-201ENSMUST00000207047 631 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm25125-201ENSMUST00000083340 136 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm6015-201ENSMUST00000217493 1586 ntBASIC8.77□□□□□ -1.01
Hmgb3O54879 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Hmgb3O54879 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm43152-201ENSMUST00000202495 1638 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm37233-201ENSMUST00000192173 6263 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm37003-201ENSMUST00000194702 2827 ntBASIC8.76□□□□□ -1.01
Hmgb3O54879 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Hmgb3O54879 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Hmgb3O54879 Gm12579-201ENSMUST00000118040 783 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms