Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.56□□□□□ -0.4
Tcof1O08784 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tcof1O08784 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tcof1O08784 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tcof1O08784 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.56□□□□□ -0.4
Tcof1O08784 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.56□□□□□ -0.4
Tcof1O08784 Gm12906-201ENSMUST00000154610 441 ntBASIC12.56□□□□□ -0.4
Tcof1O08784 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.56□□□□□ -0.4
Tcof1O08784 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Gm27440-201ENSMUST00000184785 107 ntBASIC12.56□□□□□ -0.4
Tcof1O08784 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.56□□□□□ -0.4
Tcof1O08784 Gm42751-201ENSMUST00000198065 559 ntBASIC12.56□□□□□ -0.4
Tcof1O08784 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.56□□□□□ -0.4
Tcof1O08784 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.56□□□□□ -0.4
Tcof1O08784 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.56□□□□□ -0.4
Tcof1O08784 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tcof1O08784 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.55□□□□□ -0.4
Tcof1O08784 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tcof1O08784 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Gm12947-201ENSMUST00000116114 420 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Gm11544-201ENSMUST00000120215 382 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.55□□□□□ -0.4
Tcof1O08784 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Gm25569-201ENSMUST00000157175 131 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.55□□□□□ -0.4
Tcof1O08784 Gm22876-201ENSMUST00000175450 298 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Gm37723-201ENSMUST00000194480 565 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.55□□□□□ -0.4
Tcof1O08784 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tcof1O08784 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Tcof1O08784 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Tcof1O08784 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.55□□□□□ -0.4
Tcof1O08784 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tcof1O08784 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.54□□□□□ -0.4
Tcof1O08784 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tcof1O08784 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tcof1O08784 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tcof1O08784 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.54□□□□□ -0.4
Tcof1O08784 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.54□□□□□ -0.4
Tcof1O08784 Gm6425-201ENSMUST00000136332 790 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.54□□□□□ -0.4
Tcof1O08784 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.54□□□□□ -0.4
Tcof1O08784 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tcof1O08784 Gm43610-201ENSMUST00000199117 365 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 Gm44155-201ENSMUST00000203923 412 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.54□□□□□ -0.4
Tcof1O08784 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.54□□□□□ -0.4
Tcof1O08784 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.54□□□□□ -0.4
Tcof1O08784 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tcof1O08784 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms