Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Mir6396-201ENSMUST00000183603 111 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm44304-201ENSMUST00000200509 145 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Gm44607-201ENSMUST00000205611 1090 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Gm44640-201ENSMUST00000206894 247 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Gm44548-201ENSMUST00000208929 192 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Gm44683-201ENSMUST00000209088 484 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.09□□□□□ -0.63
AlyrefO08583 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
AlyrefO08583 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
AlyrefO08583 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
AlyrefO08583 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.08□□□□□ -0.64
AlyrefO08583 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC11.08□□□□□ -0.64
AlyrefO08583 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm13255-201ENSMUST00000117255 547 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm5510-201ENSMUST00000117826 486 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm15539-201ENSMUST00000118452 566 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm14997-201ENSMUST00000119232 636 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm14153-201ENSMUST00000119923 1139 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm15329-201ENSMUST00000121408 155 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm14048-201ENSMUST00000121864 1268 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.08□□□□□ -0.64
AlyrefO08583 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm25694-201ENSMUST00000175448 282 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm17799-201ENSMUST00000183270 667 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm28937-201ENSMUST00000185413 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm29400-201ENSMUST00000187208 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm28662-201ENSMUST00000188446 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm28251-201ENSMUST00000188835 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm37318-201ENSMUST00000194325 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm38217-201ENSMUST00000194358 910 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm38017-201ENSMUST00000194768 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm37287-201ENSMUST00000195449 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm37793-201ENSMUST00000195548 695 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm9273-201ENSMUST00000200606 715 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC11.08□□□□□ -0.64
AlyrefO08583 AC172027.1-201ENSMUST00000217659 337 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 CT025538.1-201ENSMUST00000223638 369 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.08□□□□□ -0.64
AlyrefO08583 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
AlyrefO08583 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
AlyrefO08583 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
AlyrefO08583 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
AlyrefO08583 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms