Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm25116-201ENSMUST00000157191 122 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm8197-202ENSMUST00000193422 934 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm43380-201ENSMUST00000200421 220 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm39288-201ENSMUST00000210554 446 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sec61a2Q9JLR1 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.67□□□□□ -0.86
Sec61a2Q9JLR1 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms