Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Gm45331-201ENSMUST00000209868 554 ntBASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Gm5996-201ENSMUST00000211110 718 ntBASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Akt2-204ENSMUST00000108343 3122 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Gm37464-201ENSMUST00000192431 2220 ntBASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Sh3kbp1-204ENSMUST00000112451 3914 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Ano4-204ENSMUST00000182341 3959 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Vps33aQ9D2N9 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Rps6kc1-201ENSMUST00000061611 3995 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm26805-201ENSMUST00000181885 3089 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm4294-201ENSMUST00000105169 614 ntBASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm6407-201ENSMUST00000176468 549 ntBASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm27516-201ENSMUST00000184237 98 ntBASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm29067-201ENSMUST00000190821 470 ntBASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 Armcx5-201ENSMUST00000096321 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Vps33aQ9D2N9 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vps33aQ9D2N9 Pkd2l2-202ENSMUST00000166156 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vps33aQ9D2N9 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vps33aQ9D2N9 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vps33aQ9D2N9 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Vps33aQ9D2N9 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Vps33aQ9D2N9 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm14028-201ENSMUST00000117434 479 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm15276-201ENSMUST00000145953 498 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm21778-201ENSMUST00000178779 471 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm17825-201ENSMUST00000206836 794 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm6108-201ENSMUST00000208365 367 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.27□□□□□ -0.61
Vps33aQ9D2N9 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms