Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm13472-201ENSMUST00000120948 314 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm13551-201ENSMUST00000121286 430 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm22009-201ENSMUST00000158792 343 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 6330549D23Rik-202ENSMUST00000159536 1102 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm43002-201ENSMUST00000200310 155 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Dgki-201ENSMUST00000042075 3028 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm42527-201ENSMUST00000198173 1480 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Cst6-201ENSMUST00000025764 3951 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm24471-201ENSMUST00000104485 131 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Cdrt4os1-202ENSMUST00000153180 1109 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm9825-201ENSMUST00000178598 843 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm29372-201ENSMUST00000191416 364 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm38153-201ENSMUST00000195484 472 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 1810059H22Rik-202ENSMUST00000203662 546 ntTSL 3 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gm18362-201ENSMUST00000221786 529 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 AC124173.1-201ENSMUST00000223701 189 ntBASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Trpc7-201ENSMUST00000022023 3483 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cdh23Q99PF4 Trim34a-203ENSMUST00000106849 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Gm15363-201ENSMUST00000118897 631 ntBASIC10.53□□□□□ -0.72
Cdh23Q99PF4 3300005D01Rik-204ENSMUST00000181484 1174 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 AC154548.2-201ENSMUST00000224621 469 ntBASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Esd-201ENSMUST00000022573 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Asb5-201ENSMUST00000033918 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.53□□□□□ -0.72
Cdh23Q99PF4 CT030657.4-201ENSMUST00000222177 744 ntBASIC10.53□□□□□ -0.72
Cdh23Q99PF4 AC126939.2-201ENSMUST00000225989 307 ntBASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Magea8-201ENSMUST00000070141 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Gm16287-201ENSMUST00000097827 2324 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Lypd4-201ENSMUST00000079306 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Dcstamp-204ENSMUST00000227792 1367 ntBASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cdh23Q99PF4 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Gm29388-201ENSMUST00000190718 284 ntTSL 3 BASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.52□□□□□ -0.72
Cdh23Q99PF4 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms