Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Nkx6-1Q99MA9 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm7701-201ENSMUST00000163185 1479 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm12684-201ENSMUST00000118675 999 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm6686-201ENSMUST00000178455 258 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm44917-201ENSMUST00000208798 520 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm9701-201ENSMUST00000077976 427 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nkx6-1Q99MA9 Gm5472-201ENSMUST00000178604 1678 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm14148-201ENSMUST00000122433 1008 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm17799-201ENSMUST00000183270 667 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm38038-201ENSMUST00000193803 259 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.18□□□□□ -0.78
Nkx6-1Q99MA9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms