Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb17Q91VD8 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb17Q91VD8 Trpv2-201ENSMUST00000018651 2909 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pcdhb17Q91VD8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb17Q91VD8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm14932-201ENSMUST00000117112 453 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm13809-201ENSMUST00000117921 597 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm15385-201ENSMUST00000118725 667 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 B9d1os-201ENSMUST00000137010 674 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm22600-201ENSMUST00000157598 269 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm10807-201ENSMUST00000177134 795 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm29474-201ENSMUST00000187688 379 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm9540-201ENSMUST00000188230 478 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm29600-201ENSMUST00000188687 377 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm28396-201ENSMUST00000190309 379 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm38151-201ENSMUST00000195085 289 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm18635-201ENSMUST00000199020 1060 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm43378-201ENSMUST00000199336 582 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm7663-201ENSMUST00000201151 1240 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 AC117608.1-202ENSMUST00000224074 1049 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Nsd1-205ENSMUST00000224693 852 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Ntng1-201ENSMUST00000051253 327 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb17Q91VD8 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Gm13916-201ENSMUST00000117368 628 ntBASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Gm13045-201ENSMUST00000119019 712 ntBASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Gm24393-201ENSMUST00000158135 97 ntBASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb17Q91VD8 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms