Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.19□□□□□ -0.94
Tram1Q91V04 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.19□□□□□ -0.94
Tram1Q91V04 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Tram1Q91V04 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Tram1Q91V04 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 AC154176.2-201ENSMUST00000225376 6429 ntBASIC9.19□□□□□ -0.94
Tram1Q91V04 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.19□□□□□ -0.94
Tram1Q91V04 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.19□□□□□ -0.94
Tram1Q91V04 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Tram1Q91V04 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm24891-201ENSMUST00000104391 136 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm15528-201ENSMUST00000117821 864 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm9540-201ENSMUST00000188230 478 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm37666-201ENSMUST00000194110 866 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm43852-201ENSMUST00000202098 917 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.18□□□□□ -0.94
Tram1Q91V04 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.18□□□□□ -0.94
Tram1Q91V04 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.18□□□□□ -0.94
Tram1Q91V04 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Tram1Q91V04 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Tram1Q91V04 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.18□□□□□ -0.94
Tram1Q91V04 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Tram1Q91V04 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Tram1Q91V04 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Tram1Q91V04 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Tram1Q91V04 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.17□□□□□ -0.94
Tram1Q91V04 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms