Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ddx54Q8K4L0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ddx54Q8K4L0 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm2316-201ENSMUST00000190613 921 ntBASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm45363-201ENSMUST00000210196 1294 ntBASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 AC134860.5-201ENSMUST00000225071 1249 ntBASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm28653-202ENSMUST00000227082 521 ntBASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx54Q8K4L0 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Scgb1b21-201ENSMUST00000170232 268 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gm23563-201ENSMUST00000174900 251 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gm12424-201ENSMUST00000179673 447 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gm7251-201ENSMUST00000182661 1009 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gm18466-201ENSMUST00000209147 499 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 AC134607.1-201ENSMUST00000214707 485 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gm10254-201ENSMUST00000052888 867 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx54Q8K4L0 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14□□□□□ -0.17
Ddx54Q8K4L0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gm13543-201ENSMUST00000121230 796 ntBASIC14□□□□□ -0.17
Ddx54Q8K4L0 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC14□□□□□ -0.17
Ddx54Q8K4L0 Gm6426-201ENSMUST00000209048 854 ntBASIC14□□□□□ -0.17
Ddx54Q8K4L0 AC153948.2-201ENSMUST00000218112 505 ntBASIC14□□□□□ -0.17
Ddx54Q8K4L0 AC154461.3-201ENSMUST00000224831 573 ntBASIC14□□□□□ -0.17
Ddx54Q8K4L0 AC123533.3-201ENSMUST00000228056 454 ntBASIC14□□□□□ -0.17
Ddx54Q8K4L0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms