Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gm32914-201ENSMUST00000203815 2228 ntBASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Alx1Q8C8B0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Gm11824-201ENSMUST00000120191 846 ntBASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Gm25677-201ENSMUST00000174983 72 ntBASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Gm26943-201ENSMUST00000182295 957 ntBASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.48□□□□□ -0.41
Alx1Q8C8B0 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.48□□□□□ -0.41
Alx1Q8C8B0 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.48□□□□□ -0.41
Alx1Q8C8B0 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm23745-201ENSMUST00000104230 125 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Mir1249-201ENSMUST00000116791 98 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm29543-201ENSMUST00000188138 967 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm18555-201ENSMUST00000197935 584 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 AC134860.2-201ENSMUST00000225277 1036 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Gm45170-201ENSMUST00000206746 1671 ntBASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Alx1Q8C8B0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms