Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm5801-201ENSMUST00000182247 780 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm19918-201ENSMUST00000194858 400 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm31274-201ENSMUST00000197356 229 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm44216-201ENSMUST00000203942 157 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm44605-201ENSMUST00000206892 949 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm7536-201ENSMUST00000077389 444 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.79□□□□□ -0.52
Trim9Q8C7M3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm13445-201ENSMUST00000121664 307 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm12950-201ENSMUST00000121683 417 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm17221-201ENSMUST00000163909 481 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm17073-201ENSMUST00000168069 556 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm9135-201ENSMUST00000182963 990 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm27953-201ENSMUST00000185171 143 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm37390-201ENSMUST00000192452 872 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm44304-201ENSMUST00000200509 145 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm9487-201ENSMUST00000216600 472 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim9Q8C7M3 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.77□□□□□ -0.52
Trim9Q8C7M3 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms