Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm15136-201ENSMUST00000120552 533 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm43564-201ENSMUST00000196185 211 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm19566-201ENSMUST00000199576 610 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 AC161172.1-201ENSMUST00000227801 486 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.51□□□□□ -0.41
Usp44Q8C2S0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm8216-201ENSMUST00000117232 601 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm27953-201ENSMUST00000185171 143 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm37141-201ENSMUST00000191938 422 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm43506-201ENSMUST00000200675 753 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm43969-201ENSMUST00000204833 535 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm18123-201ENSMUST00000210874 822 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm18122-201ENSMUST00000211390 904 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm6390-201ENSMUST00000215034 589 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Atf7-201ENSMUST00000096143 390 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp44Q8C2S0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Gm12489-201ENSMUST00000119364 148 ntBASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Gm14213-201ENSMUST00000119778 768 ntBASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Gm15196-201ENSMUST00000121406 482 ntBASIC12.49□□□□□ -0.41
Usp44Q8C2S0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms