Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.04□□□□□ -0.64
Trub1Q8C0D0 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trub1Q8C0D0 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm12176-201ENSMUST00000121420 875 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm17192-201ENSMUST00000169031 511 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm45258-201ENSMUST00000210042 853 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trub1Q8C0D0 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trub1Q8C0D0 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trub1Q8C0D0 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trub1Q8C0D0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trub1Q8C0D0 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trub1Q8C0D0 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trub1Q8C0D0 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm11824-201ENSMUST00000120191 846 ntBASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm15031-201ENSMUST00000121341 210 ntBASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm14165-201ENSMUST00000121456 952 ntBASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm24346-201ENSMUST00000158712 194 ntBASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm37365-201ENSMUST00000193109 409 ntBASIC11.02□□□□□ -0.65
Trub1Q8C0D0 Gm43811-201ENSMUST00000202862 695 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms