Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm16166-201ENSMUST00000118291 787 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm12663-201ENSMUST00000118481 958 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Mir1893-201ENSMUST00000122565 83 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scaf4Q6PFF0 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm15285-201ENSMUST00000119271 473 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm11824-201ENSMUST00000120191 846 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm18466-201ENSMUST00000209147 499 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm44926-201ENSMUST00000207898 1826 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Gm37975-201ENSMUST00000195494 2099 ntBASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Scaf4Q6PFF0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Scaf4Q6PFF0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.52□□□□□ -0.72
Scaf4Q6PFF0 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Scaf4Q6PFF0 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Scaf4Q6PFF0 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Scaf4Q6PFF0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.52□□□□□ -0.72
Scaf4Q6PFF0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms