Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col5a2Q3U962 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm13377-201ENSMUST00000137984 683 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm43833-201ENSMUST00000198828 293 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 AC116797.2-203ENSMUST00000225290 565 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm4883-201ENSMUST00000085702 528 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm38220-201ENSMUST00000195774 1447 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm38309-201ENSMUST00000192063 1518 ntBASIC12.6□□□□□ -0.39
Col5a2Q3U962 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col5a2Q3U962 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm22582-201ENSMUST00000102283 94 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm12774-201ENSMUST00000117881 416 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Zkscan7-205ENSMUST00000216462 990 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm29783-201ENSMUST00000219398 369 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 AC116390.1-201ENSMUST00000227975 670 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 n-R5s5-201ENSMUST00000083134 119 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Pck2-205ENSMUST00000226352 2784 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm16560-201ENSMUST00000159115 404 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm18165-201ENSMUST00000217426 928 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 AC124400.2-201ENSMUST00000224939 253 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 AC140426.1-201ENSMUST00000227933 459 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col5a2Q3U962 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.59□□□□□ -0.39
Col5a2Q3U962 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a2Q3U962 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a2Q3U962 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a2Q3U962 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a2Q3U962 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a2Q3U962 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a2Q3U962 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col5a2Q3U962 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a2Q3U962 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a2Q3U962 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a2Q3U962 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a2Q3U962 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col5a2Q3U962 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms