Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 AC126459.1-201ENSMUST00000214791 2123 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm23272-201ENSMUST00000104053 129 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm19459-201ENSMUST00000176240 835 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm21092-201ENSMUST00000178995 955 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm44315-201ENSMUST00000203041 219 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm9132-201ENSMUST00000210182 832 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm5451-201ENSMUST00000080545 579 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trim43aQ3TL54 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Gm13422-201ENSMUST00000118834 504 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Gm4726-201ENSMUST00000135604 736 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Gm6019-201ENSMUST00000148369 736 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Gm5051-201ENSMUST00000204085 485 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trim43aQ3TL54 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms