Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Wdhd1-201ENSMUST00000111790 2962 ntTSL 2 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Ccdc33-210ENSMUST00000215944 3012 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Atrip-205ENSMUST00000161521 2381 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Zcchc12-203ENSMUST00000115257 2051 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Srgap2-204ENSMUST00000186543 3533 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm28775-201ENSMUST00000186918 2167 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 B9d1os-201ENSMUST00000137010 674 ntBASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Morn2-202ENSMUST00000227729 656 ntBASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Plcd4-201ENSMUST00000027362 2977 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ccbe1Q3MI99 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm44741-201ENSMUST00000207503 2127 ntBASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm12830-201ENSMUST00000137570 2306 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ccbe1Q3MI99 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm15617-201ENSMUST00000118973 771 ntBASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ccbe1Q3MI99 Gm13316-201ENSMUST00000140537 691 ntBASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms