Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm13351-201ENSMUST00000118087 414 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Gm15782-201ENSMUST00000121073 445 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm6425-201ENSMUST00000136332 790 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm26119-201ENSMUST00000175601 104 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Gm45120-201ENSMUST00000208880 408 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.6□□□□□ -0.71
Pdx1P52946 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pdx1P52946 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pdx1P52946 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Pdx1P52946 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.6□□□□□ -0.71
Pdx1P52946 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdx1P52946 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.59□□□□□ -0.71
Pdx1P52946 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.59□□□□□ -0.71
Pdx1P52946 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Spata33-207ENSMUST00000212760 4074 ntBASIC10.59□□□□□ -0.71
Pdx1P52946 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm9574-201ENSMUST00000173127 845 ntBASIC10.59□□□□□ -0.71
Pdx1P52946 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.59□□□□□ -0.71
Pdx1P52946 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm43912-201ENSMUST00000204352 538 ntBASIC10.59□□□□□ -0.71
Pdx1P52946 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pdx1P52946 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pdx1P52946 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pdx1P52946 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.59□□□□□ -0.71
Pdx1P52946 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.59□□□□□ -0.71
Pdx1P52946 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pdx1P52946 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdx1P52946 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.58□□□□□ -0.71
Pdx1P52946 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
Pdx1P52946 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Pdx1P52946 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pdx1P52946 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pdx1P52946 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdx1P52946 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms