Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.1□□□□□ -0.95
Srp9P49962 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.1□□□□□ -0.95
Srp9P49962 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.1□□□□□ -0.95
Srp9P49962 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Srp9P49962 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Gm10020-201ENSMUST00000081993 612 ntBASIC9.1□□□□□ -0.95
Srp9P49962 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Srp9P49962 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
Srp9P49962 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.1□□□□□ -0.95
Srp9P49962 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.1□□□□□ -0.95
Srp9P49962 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Srp9P49962 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC9.1□□□□□ -0.95
Srp9P49962 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.1□□□□□ -0.95
Srp9P49962 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Srp9P49962 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Srp9P49962 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Srp9P49962 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Srp9P49962 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.09□□□□□ -0.95
Srp9P49962 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.09□□□□□ -0.95
Srp9P49962 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Gm11949-201ENSMUST00000117640 372 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm13408-201ENSMUST00000119822 798 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm13935-201ENSMUST00000121859 798 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.09□□□□□ -0.95
Srp9P49962 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.09□□□□□ -0.95
Srp9P49962 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Gm24992-201ENSMUST00000157412 130 ntBASIC9.09□□□□□ -0.95
Srp9P49962 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.09□□□□□ -0.95
Srp9P49962 Gm3551-201ENSMUST00000190750 664 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm29067-201ENSMUST00000190821 470 ntBASIC9.09□□□□□ -0.95
Srp9P49962 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm38321-201ENSMUST00000195053 235 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm43068-201ENSMUST00000201095 1273 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.09□□□□□ -0.95
Srp9P49962 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Srp9P49962 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.09□□□□□ -0.95
Srp9P49962 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Srp9P49962 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Srp9P49962 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.08□□□□□ -0.96
Srp9P49962 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Srp9P49962 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Srp9P49962 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Srp9P49962 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.08□□□□□ -0.96
Srp9P49962 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Srp9P49962 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC9.08□□□□□ -0.96
Srp9P49962 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.08□□□□□ -0.96
Srp9P49962 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Srp9P49962 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms