Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm16518-201ENSMUST00000117960 508 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Gm12435-201ENSMUST00000118949 1016 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Gm6517-201ENSMUST00000121056 511 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm26208-201ENSMUST00000158677 124 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm18443-201ENSMUST00000185358 556 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Gm37009-201ENSMUST00000193297 361 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Gm42710-201ENSMUST00000200608 985 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 AC107711.3-201ENSMUST00000228939 1035 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cdx2P43241 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10.22□□□□□ -0.77
Cdx2P43241 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cdx2P43241 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cdx2P43241 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cdx2P43241 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Cdx2P43241 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.21□□□□□ -0.77
Cdx2P43241 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Cdx2P43241 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Cdx2P43241 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm6276-201ENSMUST00000120159 579 ntBASIC10.21□□□□□ -0.77
Cdx2P43241 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm38007-201ENSMUST00000192187 313 ntBASIC10.21□□□□□ -0.77
Cdx2P43241 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm9515-201ENSMUST00000200276 647 ntBASIC10.21□□□□□ -0.77
Cdx2P43241 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Cdx2P43241 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC10.21□□□□□ -0.77
Cdx2P43241 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cdx2P43241 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.21□□□□□ -0.77
Cdx2P43241 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Cdx2P43241 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Cdx2P43241 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.21□□□□□ -0.78
Cdx2P43241 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.21□□□□□ -0.78
Cdx2P43241 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.21□□□□□ -0.78
Cdx2P43241 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.21□□□□□ -0.78
Cdx2P43241 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Cdx2P43241 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Cdx2P43241 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.21□□□□□ -0.78
Cdx2P43241 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Cdx2P43241 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Cdx2P43241 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx2P43241 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx2P43241 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
Cdx2P43241 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx2P43241 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx2P43241 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Cdx2P43241 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx2P43241 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx2P43241 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cdx2P43241 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cdx2P43241 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Cdx2P43241 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Cdx2P43241 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms