Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.59□□□□□ -0.71
Cd9P40240 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.59□□□□□ -0.71
Cd9P40240 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.59□□□□□ -0.71
Cd9P40240 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Cd9P40240 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cd9P40240 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cd9P40240 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.71
Cd9P40240 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.58□□□□□ -0.71
Cd9P40240 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cd9P40240 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.58□□□□□ -0.72
Cd9P40240 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.58□□□□□ -0.72
Cd9P40240 Mir291b-201ENSMUST00000104838 79 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm15285-201ENSMUST00000119271 473 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm12489-201ENSMUST00000119364 148 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm12176-201ENSMUST00000121420 875 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.58□□□□□ -0.72
Cd9P40240 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.58□□□□□ -0.72
Cd9P40240 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm26208-201ENSMUST00000158677 124 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Cd9P40240 Gm26119-201ENSMUST00000175601 104 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm37390-201ENSMUST00000192452 872 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm44498-201ENSMUST00000199509 111 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm9139-201ENSMUST00000218817 700 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm3619-201ENSMUST00000219947 775 ntBASIC10.58□□□□□ -0.72
Cd9P40240 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Gm18968-201ENSMUST00000221319 862 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cd9P40240 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd9P40240 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.58□□□□□ -0.72
Cd9P40240 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.58□□□□□ -0.72
Cd9P40240 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Cd9P40240 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.58□□□□□ -0.72
Cd9P40240 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd9P40240 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cd9P40240 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd9P40240 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cd9P40240 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.57□□□□□ -0.72
Cd9P40240 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cd9P40240 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Cd9P40240 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd9P40240 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd9P40240 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd9P40240 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd9P40240 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cd9P40240 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.57□□□□□ -0.72
Cd9P40240 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd9P40240 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd9P40240 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms