Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm6905-201ENSMUST00000205729 511 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.37□□□□□ -0.91
Cd28P31041 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
Cd28P31041 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.37□□□□□ -0.91
Cd28P31041 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm26670-201ENSMUST00000180429 3287 ntBASIC9.37□□□□□ -0.91
Cd28P31041 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cd28P31041 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.37□□□□□ -0.91
Cd28P31041 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cd28P31041 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cd28P31041 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm38199-201ENSMUST00000192013 3277 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm22920-201ENSMUST00000102175 109 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Gm14193-201ENSMUST00000105067 153 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Gm7851-201ENSMUST00000117574 323 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Gm15615-201ENSMUST00000118876 198 ntBASIC9.36□□□□□ -0.91
Cd28P31041 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Cd28P31041 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm44155-201ENSMUST00000203923 412 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cd28P31041 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Cd28P31041 Gm5468-202ENSMUST00000227851 682 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Cd28P31041 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Gm23105-201ENSMUST00000083719 134 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.36□□□□□ -0.91
Cd28P31041 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Cd28P31041 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cd28P31041 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms