Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Pde6aP27664 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6aP27664 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm15136-201ENSMUST00000120552 533 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gm15196-201ENSMUST00000121406 482 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.43□□□□□ -0.42
Pde6aP27664 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6aP27664 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6aP27664 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm43564-201ENSMUST00000196185 211 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6aP27664 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm4604-201ENSMUST00000025040 390 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6aP27664 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6aP27664 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Pde6aP27664 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gm42587-201ENSMUST00000198462 1981 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pde6aP27664 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm23612-201ENSMUST00000103823 110 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13022-201ENSMUST00000121181 285 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Gm11675-201ENSMUST00000121873 832 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Gm16397-201ENSMUST00000122201 494 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm23218-201ENSMUST00000158124 276 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Gm26208-201ENSMUST00000158677 124 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm23576-201ENSMUST00000179918 110 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Gm42780-201ENSMUST00000197083 734 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.42□□□□□ -0.42
Pde6aP27664 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.42□□□□□ -0.42
Pde6aP27664 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6aP27664 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.42□□□□□ -0.42
Pde6aP27664 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.42□□□□□ -0.42
Pde6aP27664 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6aP27664 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pde6aP27664 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pde6aP27664 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6aP27664 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pde6aP27664 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Pde6aP27664 Gm22582-201ENSMUST00000102283 94 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Gm11619-201ENSMUST00000117474 237 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6aP27664 Gm5700-201ENSMUST00000191483 989 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 Gm5881-201ENSMUST00000204737 367 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms