Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm45354-201ENSMUST00000199820 2557 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm44510-201ENSMUST00000206288 4532 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC8.71□□□□□ -1.02
Cdx1P18111 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC8.71□□□□□ -1.02
Cdx1P18111 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gm5159-201ENSMUST00000212733 1652 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Cdx1P18111 AC171277.1-201ENSMUST00000216902 1441 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC8.71□□□□□ -1.02
Cdx1P18111 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Cdx1P18111 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm37731-201ENSMUST00000194545 2237 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm37843-201ENSMUST00000195213 2639 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 AC154528.2-201ENSMUST00000228432 3023 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
Cdx1P18111 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm13809-201ENSMUST00000117921 597 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm14460-201ENSMUST00000121511 639 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC8.7□□□□□ -1.02
Cdx1P18111 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC8.7□□□□□ -1.02
Cdx1P18111 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Cdx1P18111 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm45909-201ENSMUST00000212413 1031 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Cdx1P18111 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 AC149588.2-201ENSMUST00000228182 1859 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm1840-201ENSMUST00000051687 1432 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC8.7□□□□□ -1.02
Cdx1P18111 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC8.7□□□□□ -1.02
Cdx1P18111 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Cdx1P18111 AC117648.1-201ENSMUST00000219777 2510 ntBASIC8.7□□□□□ -1.02
Cdx1P18111 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Cdx1P18111 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Cdx1P18111 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms